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From2008-03-16
To2008-03-20
Course
Lectures and workshops address key topics relevant for the lab scientist. These topics include genome and protein functional and structural interpretation, gene regulation, bioinformatics of genetics as well as data integration and biological information systems. In addition, analysis molecular networks, and the compilation of qualitative and quantitative models will be presented. The course comprises basic knowledge together with the state of the art. Topics are presented by faculty members with sound experience in the field. The audience addressed are Ph.D. students as well as post-docs. Prerequisites should be a sound biological and some basic knowledge in bioinformatics (e.g. BLAST etc.).

 

VenueBertinoro di Romagna, ITALY
Directors

H. W. Mewes (Munich, Germany)

Speakers

D. Frishman (Munich, Germany), L. U. Jensen (Heidelberg, Germany), R. K?ffner (Munich, Germany), P. Pagel (Munich, Germany), A. Pfeufer (Munich, Germany), G. Raetsch (T?bingen, Germany), T. Rattei (Munich, Germany), M. Scherf (Munich, Germany), V. St?mpflen (Munich, Germany), K. Suhre (Munich, Germany), F. Theis (Munich, Germany), R. Zimmer (Munich, Germany)

Programme

Sunday, March 16

 

Morning Session

9:00

H. W. Mewes

Introduction to the Course 
Basic Bioinformatics
Introduction of the Participants

10:30

D. Frishman

Genome Analysis: From Annotation to Automation

12:00

T. Rattei

Bioinformatics Databases and Resources

13:00

 

Lunch

15:00

L.J. Jensen

Integration of diverse Information: STRING

17:00

 

WORKSHOPS

 

Monday, March 17

 

Functional Analysis

9:00

A. Pfeufer

Bioinformatics for Genetics

10:30

D. Frishman

Structural Bioinformatics

12:00

K. Suhre

Metabolomics

13:00

 

Lunch

15:00

M. Scherf

Regulation

 

 

 

 

 

 

 

 

 

Tuesday, March 18

 

More Functional Analysis

9:00

R. Küffner

Gene Expression microarrays

10:30

P. Pagel

Protein/Protein Interactions

Mathematics and Statistics

12:00

F. Theis

What is an algorithm –what statistics and math is good for?

13:00

 

Lunch

 

Wednesday, March 19

 

Search for information in Data and Text

9.00

G. Raetsch

Data Mining in Biology

10:30

V. Stümpflen

Biological Information Systems for qualitative Models

Systems Biology

12:00

H. W. Mewes

From Bioinformatics to Systems Biology

13:00

 

Lunch

15:00

R. Zimmer

Computational Biology for Network Analysis

 

Thursday, March 20

 

More Systems Biology

9:00

F. Theis

Qualitative Models

11:00

 

Summary and Round Table

13:00

 

Lunch

DEPARTURE

European School of Genetic Medicine